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In page Monte Carlo method:

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Monte Carlo methods are used in various fields of computational biology, for example for Bayesian inference in phylogeny, or for studying biological systems such as genomes, proteins,[1] or membranes.[2] The systems can be studied in the coarse-grained or ab initio frameworks depending on the desired accuracy. Computer simulations allow monitoring of the local environment of a particular molecule to see if some chemical reaction is happening for instance. In cases where it is not feasible to conduct a physical experiment, thought experiments can be conducted, e.g. breaking bonds, introducing impurities at specific sites, changing the local/global structure, or introducing external fields.[citation needed]